WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2023.1e.1 Sequence Name  D2023.1e.1
Length (nt)  1930   Chromosome Location  V: 11789550-11800544
Chromosome . Primary Identifier  V Chromosome Location . Start  11789550
Chromosome Location . End  11800544 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2023.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014300 D2023.1 D2023.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2023.1e D2023.1e 999   V: 11789770-11789773

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2023.1e.1 11789550 11800544 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199658   224   V: 11789550-11789773 Caenorhabditis elegans
Exon199663   155   V: 11791233-11791387 Caenorhabditis elegans
Exon199667   139   V: 11791439-11791577 Caenorhabditis elegans
Exon199671   113   V: 11791636-11791748 Caenorhabditis elegans
Exon199675   102   V: 11792269-11792370 Caenorhabditis elegans
Exon199679   81   V: 11792421-11792501 Caenorhabditis elegans
Exon199688   253   V: 11794925-11795177 Caenorhabditis elegans
Exon199694   95   V: 11795224-11795318 Caenorhabditis elegans
Exon199702   126   V: 11795650-11795775 Caenorhabditis elegans
Exon199707   180   V: 11799846-11800025 Caenorhabditis elegans
Exon199716   462   V: 11800083-11800544 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2023.1e.1 11789550 11800544 1

1 Sequence

Length
1930

1 Sequence Ontology Term

Identifier Name Description
transcript