WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:D2023.3a.1 Sequence Name  D2023.3a.1
Length (nt)  1044   Chromosome Location  V: 11801827-11812021
Chromosome . Primary Identifier  V Chromosome Location . Start  11801827
Chromosome Location . End  11812021 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2023.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008407 D2023.3 D2023.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2023.3a D2023.3a 669   V: 11802124-11802171

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2023.3a.1 11801827 11812021 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199718   345   V: 11801827-11802171 Caenorhabditis elegans
Exon199720   153   V: 11803926-11804078 Caenorhabditis elegans
Exon199724   213   V: 11804984-11805196 Caenorhabditis elegans
Exon199727   114   V: 11805538-11805651 Caenorhabditis elegans
Exon199730   121   V: 11811423-11811543 Caenorhabditis elegans
Exon199731   98   V: 11811924-11812021 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2023.3a.1 11801827 11812021 -1

1 Sequence

Length
1044

1 Sequence Ontology Term

Identifier Name Description
transcript