WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2023.2a.2 Sequence Name  D2023.2a.2
Length (nt)  4003   Chromosome Location  V: 11817783-11822529
Chromosome . Primary Identifier  V Chromosome Location . Start  11817783
Chromosome Location . End  11822529 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2023.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004258 pyc-1 D2023.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2023.2a D2023.2a 3528   V: 11818130-11818279

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2023.2a.2 11817783 11822529 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199733   497   V: 11817783-11818279 Caenorhabditis elegans
Exon199737   243   V: 11818538-11818780 Caenorhabditis elegans
Exon199740   674   V: 11818841-11819514 Caenorhabditis elegans
Exon199743   761   V: 11819559-11820319 Caenorhabditis elegans
Exon199747   347   V: 11820367-11820713 Caenorhabditis elegans
Exon199749   617   V: 11820860-11821476 Caenorhabditis elegans
Exon199751   427   V: 11821523-11821949 Caenorhabditis elegans
Exon199753   207   V: 11821994-11822200 Caenorhabditis elegans
Exon199755   115   V: 11822251-11822365 Caenorhabditis elegans
Exon199756   115   V: 11822415-11822529 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2023.2a.2 11817783 11822529 -1

1 Sequence

Length
4003

1 Sequence Ontology Term

Identifier Name Description
transcript