WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13H4.3.1 Sequence Name  R13H4.3.1
Length (nt)  1292   Chromosome Location  V: 11833619-11835708
Chromosome . Primary Identifier  V Chromosome Location . Start  11833619
Chromosome Location . End  11835708 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13H4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011262 pho-8 R13H4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13H4.3 R13H4.3 1209   V: 11833645-11833824

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13H4.3.1 11833619 11835708 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199777   206   V: 11833619-11833824 Caenorhabditis elegans
Exon199778   93   V: 11834192-11834284 Caenorhabditis elegans
Exon199779   156   V: 11834334-11834489 Caenorhabditis elegans
Exon199780   420   V: 11834676-11835095 Caenorhabditis elegans
Exon199781   120   V: 11835141-11835260 Caenorhabditis elegans
Exon199782   135   V: 11835366-11835500 Caenorhabditis elegans
Exon199783   162   V: 11835547-11835708 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13H4.3.1 11833619 11835708 1

1 Sequence

Length
1292

1 Sequence Ontology Term

Identifier Name Description
transcript