WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R13H4.4a Sequence Name  R13H4.4a
Length (nt)  2784   Chromosome Location  V: 11845878-11846261
Chromosome . Primary Identifier  V Chromosome Location . Start  11845878
Chromosome Location . End  11846261
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13H4.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25089 HMP-1, isoform a 104.0 927 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00077351
WBRNAi00051940
WBRNAi00063482
WBRNAi00063483
WBRNAi00063484
WBRNAi00063488
WBRNAi00093057
WBRNAi00091281
WBRNAi00063487
WBRNAi00101428
WBRNAi00101412
WBRNAi00101410
WBRNAi00101430
WBRNAi00091282
WBRNAi00091283
WBRNAi00077347
WBRNAi00077349
WBRNAi00077352

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R13H4.4a 11845878 11846261 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001978 hmp-1 R13H4.4 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:R13H4.4a 11845878 11846261 1
CDS:R13H4.4a 11846306 11846761 1
CDS:R13H4.4a 11846808 11847011 1
CDS:R13H4.4a 11847407 11847937 1
CDS:R13H4.4a 11848040 11848867 1
CDS:R13H4.4a 11849351 11849491 1
CDS:R13H4.4a 11850781 11850881 1
CDS:R13H4.4a 11851632 11851770 1

1 Sequence

Length
2784

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R13H4.4a.1 R13H4.4a.1 3179   V: 11845877-11852164