WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K12G11.1.1 Sequence Name  K12G11.1.1
Length (nt)  2385   Chromosome Location  V: 11875360-11879141
Chromosome . Primary Identifier  V Chromosome Location . Start  11875360
Chromosome Location . End  11879141 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12G11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010788 sulp-4 K12G11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12G11.1 K12G11.1 2250   V: 11875368-11875511

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K12G11.1.1 11875360 11879141 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199911   152   V: 11875360-11875511 Caenorhabditis elegans
Exon199912   238   V: 11875597-11875834 Caenorhabditis elegans
Exon199913   111   V: 11875887-11875997 Caenorhabditis elegans
Exon199914   167   V: 11876043-11876209 Caenorhabditis elegans
Exon199915   561   V: 11876600-11877160 Caenorhabditis elegans
Exon199916   192   V: 11877206-11877397 Caenorhabditis elegans
Exon199917   96   V: 11877440-11877535 Caenorhabditis elegans
Exon199918   107   V: 11877582-11877688 Caenorhabditis elegans
Exon199919   138   V: 11877738-11877875 Caenorhabditis elegans
Exon199920   133   V: 11877924-11878056 Caenorhabditis elegans
Exon199921   120   V: 11878100-11878219 Caenorhabditis elegans
Exon199922   167   V: 11878727-11878893 Caenorhabditis elegans
Exon199923   203   V: 11878939-11879141 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K12G11.1.1 11875360 11879141 1

1 Sequence

Length
2385

1 Sequence Ontology Term

Identifier Name Description
transcript