WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K12G11.2.1 Sequence Name  K12G11.2.1
Length (nt)  2273   Chromosome Location  V: 11880032-11883219
Chromosome . Primary Identifier  V Chromosome Location . Start  11880032
Chromosome Location . End  11883219 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12G11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010789 sulp-5 K12G11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12G11.2 K12G11.2 2214   V: 11880032-11880145

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K12G11.2.1 11880032 11883219 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199924   114   V: 11880032-11880145 Caenorhabditis elegans
Exon199925   86   V: 11880190-11880275 Caenorhabditis elegans
Exon199926   155   V: 11880358-11880512 Caenorhabditis elegans
Exon199927   272   V: 11880733-11881004 Caenorhabditis elegans
Exon199928   168   V: 11881047-11881214 Caenorhabditis elegans
Exon199929   162   V: 11881258-11881419 Caenorhabditis elegans
Exon199930   83   V: 11881466-11881548 Caenorhabditis elegans
Exon199931   436   V: 11881599-11882034 Caenorhabditis elegans
Exon199932   107   V: 11882111-11882217 Caenorhabditis elegans
Exon199933   138   V: 11882265-11882402 Caenorhabditis elegans
Exon199934   139   V: 11882446-11882584 Caenorhabditis elegans
Exon199937   163   V: 11882646-11882808 Caenorhabditis elegans
Exon199938   112   V: 11882854-11882965 Caenorhabditis elegans
Exon199939   138   V: 11883082-11883219 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K12G11.2.1 11880032 11883219 1

1 Sequence

Length
2273

1 Sequence Ontology Term

Identifier Name Description
transcript