WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K12G11.4.1 Sequence Name  K12G11.4.1
Length (nt)  1251   Chromosome Location  V: 11889581-11891243
Chromosome . Primary Identifier  V Chromosome Location . Start  11889581
Chromosome Location . End  11891243 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12G11.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010791 sodh-2 K12G11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12G11.4 K12G11.4 1056   V: 11889719-11889940

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K12G11.4.1 11889581 11891243 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199943   360   V: 11889581-11889940 Caenorhabditis elegans
Exon199944   549   V: 11890244-11890792 Caenorhabditis elegans
Exon199945   342   V: 11890902-11891243 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K12G11.4.1 11889581 11891243 -1

1 Sequence

Length
1251

1 Sequence Ontology Term

Identifier Name Description
transcript