WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K12G11.1.1 Sequence Name  K12G11.1.1
Length (nt)  2385   Chromosome Location  V: 11875360-11879141
Chromosome . Primary Identifier  V Chromosome Location . Start  11875360
Chromosome Location . End  11879141 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12G11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010788 sulp-4 K12G11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12G11.1 K12G11.1 2250   V: 11875368-11875511

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K12G11.1.1 11875360 11879141 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199966   152   V: 11875360-11875511 Caenorhabditis elegans
Exon199967   238   V: 11875597-11875834 Caenorhabditis elegans
Exon199968   111   V: 11875887-11875997 Caenorhabditis elegans
Exon199969   167   V: 11876043-11876209 Caenorhabditis elegans
Exon199970   561   V: 11876600-11877160 Caenorhabditis elegans
Exon199971   192   V: 11877206-11877397 Caenorhabditis elegans
Exon199972   96   V: 11877440-11877535 Caenorhabditis elegans
Exon199973   107   V: 11877582-11877688 Caenorhabditis elegans
Exon199974   138   V: 11877738-11877875 Caenorhabditis elegans
Exon199975   133   V: 11877924-11878056 Caenorhabditis elegans
Exon199976   120   V: 11878100-11878219 Caenorhabditis elegans
Exon199977   167   V: 11878727-11878893 Caenorhabditis elegans
Exon199978   203   V: 11878939-11879141 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K12G11.1.1 11875360 11879141 1

1 Sequence

Length
2385

1 Sequence Ontology Term

Identifier Name Description
transcript