WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K12G11.5.1 Sequence Name  K12G11.5.1
Length (nt)  966   Chromosome Location  V: 11891812-11893451
Chromosome . Primary Identifier  V Chromosome Location . Start  11891812
Chromosome Location . End  11893451 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12G11.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005967 srx-76 K12G11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12G11.5 K12G11.5 966   V: 11891812-11891883

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K12G11.5.1 11891812 11893451 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199946   72   V: 11891812-11891883 Caenorhabditis elegans
Exon199947   164   V: 11891931-11892094 Caenorhabditis elegans
Exon199948   233   V: 11892528-11892760 Caenorhabditis elegans
Exon199949   155   V: 11892808-11892962 Caenorhabditis elegans
Exon199950   125   V: 11893009-11893133 Caenorhabditis elegans
Exon199951   75   V: 11893186-11893260 Caenorhabditis elegans
Exon199952   142   V: 11893310-11893451 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K12G11.5.1 11891812 11893451 1

1 Sequence

Length
966

1 Sequence Ontology Term

Identifier Name Description
transcript