WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R31.3.1 Sequence Name  R31.3.1
Length (nt)  1508   Chromosome Location  V: 11924621-11927446
Chromosome . Primary Identifier  V Chromosome Location . Start  11924621
Chromosome Location . End  11927446 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R31.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003886 osm-6 R31.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R31.3 R31.3 1419   V: 11924670-11924944

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R31.3.1 11924621 11927446 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200140   324   V: 11924621-11924944 Caenorhabditis elegans
Exon200141   197   V: 11924990-11925186 Caenorhabditis elegans
Exon200142   110   V: 11925611-11925720 Caenorhabditis elegans
Exon200143   120   V: 11925766-11925885 Caenorhabditis elegans
Exon200144   87   V: 11925998-11926084 Caenorhabditis elegans
Exon200145   142   V: 11926132-11926273 Caenorhabditis elegans
Exon200146   133   V: 11926362-11926494 Caenorhabditis elegans
Exon200147   121   V: 11926544-11926664 Caenorhabditis elegans
Exon200148   88   V: 11926743-11926830 Caenorhabditis elegans
Exon200149   116   V: 11927213-11927328 Caenorhabditis elegans
Exon200150   70   V: 11927377-11927446 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R31.3.1 11924621 11927446 -1

1 Sequence

Length
1508

1 Sequence Ontology Term

Identifier Name Description
transcript