WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C52E4.2b.1 Sequence Name  C52E4.2b.1
Length (nt)  273   Chromosome Location  V: 11976877-11977447
Chromosome . Primary Identifier  V Chromosome Location . Start  11976877
Chromosome Location . End  11977447 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52E4.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003235 mif-2 C52E4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C52E4.2b C52E4.2b 273   V: 11976877-11976957

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C52E4.2b.1 11976877 11977447 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200173   81   V: 11976877-11976957 Caenorhabditis elegans
Exon200177   99   V: 11977050-11977148 Caenorhabditis elegans
Exon200181   60   V: 11977312-11977371 Caenorhabditis elegans
Exon200183   33   V: 11977415-11977447 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C52E4.2b.1 11976877 11977447 -1

1 Sequence

Length
273

1 Sequence Ontology Term

Identifier Name Description
transcript