WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10C2.5.1 Sequence Name  F10C2.5.1
Length (nt)  2547   Chromosome Location  V: 12045432-12048631
Chromosome . Primary Identifier  V Chromosome Location . Start  12045432
Chromosome Location . End  12048631 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10C2.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008646 F10C2.5 F10C2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10C2.5 F10C2.5 2346   V: 12045432-12045864

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10C2.5.1 12045432 12048631 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200381   433   V: 12045432-12045864 Caenorhabditis elegans
Exon200382   195   V: 12045918-12046112 Caenorhabditis elegans
Exon200383   593   V: 12046161-12046753 Caenorhabditis elegans
Exon200384   315   V: 12046816-12047130 Caenorhabditis elegans
Exon200385   528   V: 12047177-12047704 Caenorhabditis elegans
Exon200386   483   V: 12048149-12048631 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10C2.5.1 12045432 12048631 1

1 Sequence

Length
2547

1 Sequence Ontology Term

Identifier Name Description
transcript