WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07B7.2c.1 Sequence Name  R07B7.2c.1
Length (nt)  2136   Chromosome Location  V: 12056562-12059749
Chromosome . Primary Identifier  V Chromosome Location . Start  12056562
Chromosome Location . End  12059749 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B7.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011087 R07B7.2 R07B7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07B7.2c R07B7.2c 1917   V: 12056779-12056882

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07B7.2c.1 12056562 12059749 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200456   321   V: 12056562-12056882 Caenorhabditis elegans
Exon200460   207   V: 12056940-12057146 Caenorhabditis elegans
Exon200464   186   V: 12057300-12057485 Caenorhabditis elegans
Exon200467   222   V: 12057527-12057748 Caenorhabditis elegans
Exon200472   102   V: 12057799-12057900 Caenorhabditis elegans
Exon200476   138   V: 12057970-12058107 Caenorhabditis elegans
Exon200480   189   V: 12058531-12058719 Caenorhabditis elegans
Exon200484   99   V: 12058768-12058866 Caenorhabditis elegans
Exon200488   135   V: 12058933-12059067 Caenorhabditis elegans
Exon200492   537   V: 12059213-12059749 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07B7.2c.1 12056562 12059749 -1

1 Sequence

Length
2136

1 Sequence Ontology Term

Identifier Name Description
transcript