WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07B7.3a.1 Sequence Name  R07B7.3a.1
Length (nt)  1243   Chromosome Location  V: 12063476-12065391
Chromosome . Primary Identifier  V Chromosome Location . Start  12063476
Chromosome Location . End  12065391 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B7.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004138 pqn-53 R07B7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07B7.3a R07B7.3a 1086   V: 12063601-12063684

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07B7.3a.1 12063476 12065391 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200449   209   V: 12063476-12063684 Caenorhabditis elegans
Exon200451   213   V: 12063822-12064034 Caenorhabditis elegans
Exon200453   390   V: 12064091-12064480 Caenorhabditis elegans
Exon200456   57   V: 12064863-12064919 Caenorhabditis elegans
Exon200457   219   V: 12064967-12065185 Caenorhabditis elegans
Exon200460   155   V: 12065237-12065391 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07B7.3a.1 12063476 12065391 -1

1 Sequence

Length
1243

1 Sequence Ontology Term

Identifier Name Description
transcript