WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07B7.8.1 Sequence Name  R07B7.8.1
Length (nt)  1822   Chromosome Location  V: 12081085-12084316
Chromosome . Primary Identifier  V Chromosome Location . Start  12081085
Chromosome Location . End  12084316 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B7.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011092 R07B7.8 R07B7.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07B7.8 R07B7.8 1311   V: 12081278-12081319

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07B7.8.1 12081085 12084316 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200528   235   V: 12081085-12081319 Caenorhabditis elegans
Exon200530   174   V: 12081370-12081543 Caenorhabditis elegans
Exon200532   163   V: 12081862-12082024 Caenorhabditis elegans
Exon200534   227   V: 12082115-12082341 Caenorhabditis elegans
Exon200536   170   V: 12082393-12082562 Caenorhabditis elegans
Exon200538   106   V: 12082608-12082713 Caenorhabditis elegans
Exon200540   155   V: 12082786-12082940 Caenorhabditis elegans
Exon200542   60   V: 12082993-12083052 Caenorhabditis elegans
Exon200544   142   V: 12083163-12083304 Caenorhabditis elegans
Exon200547   60   V: 12083346-12083405 Caenorhabditis elegans
Exon200549   167   V: 12083449-12083615 Caenorhabditis elegans
Exon200551   163   V: 12084154-12084316 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07B7.8.1 12081085 12084316 -1

1 Sequence

Length
1822

1 Sequence Ontology Term

Identifier Name Description
transcript