WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07B7.8.2 Sequence Name  R07B7.8.2
Length (nt)  1777   Chromosome Location  V: 12081085-12083733
Chromosome . Primary Identifier  V Chromosome Location . Start  12081085
Chromosome Location . End  12083733 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B7.8.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011092 R07B7.8 R07B7.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07B7.8 R07B7.8 1311   V: 12081278-12081319

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07B7.8.2 12081085 12083733 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200529   235   V: 12081085-12081319 Caenorhabditis elegans
Exon200531   174   V: 12081370-12081543 Caenorhabditis elegans
Exon200533   163   V: 12081862-12082024 Caenorhabditis elegans
Exon200535   227   V: 12082115-12082341 Caenorhabditis elegans
Exon200537   170   V: 12082393-12082562 Caenorhabditis elegans
Exon200539   106   V: 12082608-12082713 Caenorhabditis elegans
Exon200541   155   V: 12082786-12082940 Caenorhabditis elegans
Exon200543   60   V: 12082993-12083052 Caenorhabditis elegans
Exon200545   142   V: 12083163-12083304 Caenorhabditis elegans
Exon200548   60   V: 12083346-12083405 Caenorhabditis elegans
Exon200550   285   V: 12083449-12083733 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07B7.8.2 12081085 12083733 -1

1 Sequence

Length
1777

1 Sequence Ontology Term

Identifier Name Description
transcript