WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07B7.11.1 Sequence Name  R07B7.11.1
Length (nt)  1464   Chromosome Location  V: 12087234-12088931
Chromosome . Primary Identifier  V Chromosome Location . Start  12087234
Chromosome Location . End  12088931 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B7.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011095 gana-1 R07B7.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07B7.11 R07B7.11 1356   V: 12087238-12087418

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07B7.11.1 12087234 12088931 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200558   185   V: 12087234-12087418 Caenorhabditis elegans
Exon200559   140   V: 12087464-12087603 Caenorhabditis elegans
Exon200560   630   V: 12087675-12088304 Caenorhabditis elegans
Exon200561   102   V: 12088355-12088456 Caenorhabditis elegans
Exon200562   407   V: 12088525-12088931 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07B7.11.1 12087234 12088931 1

1 Sequence

Length
1464

1 Sequence Ontology Term

Identifier Name Description
transcript