WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07B7.15.1 Sequence Name  R07B7.15.1
Length (nt)  1290   Chromosome Location  V: 12094317-12095895
Chromosome . Primary Identifier  V Chromosome Location . Start  12094317
Chromosome Location . End  12095895 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B7.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011099 nhr-208 R07B7.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07B7.15 R07B7.15 1233   V: 12094374-12094412

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07B7.15.1 12094317 12095895 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200588   96   V: 12094317-12094412 Caenorhabditis elegans
Exon200589   129   V: 12094472-12094600 Caenorhabditis elegans
Exon200590   109   V: 12094650-12094758 Caenorhabditis elegans
Exon200591   152   V: 12094804-12094955 Caenorhabditis elegans
Exon200592   191   V: 12095000-12095190 Caenorhabditis elegans
Exon200593   353   V: 12095239-12095591 Caenorhabditis elegans
Exon200594   260   V: 12095636-12095895 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07B7.15.1 12094317 12095895 1

1 Sequence

Length
1290

1 Sequence Ontology Term

Identifier Name Description
transcript