WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C13C4.6.1 Sequence Name  C13C4.6.1
Length (nt)  1581   Chromosome Location  V: 12121574-12124939
Chromosome . Primary Identifier  V Chromosome Location . Start  12121574
Chromosome Location . End  12124939 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13C4.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007550 C13C4.6 C13C4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C13C4.6 C13C4.6 1404   V: 12121669-12121701

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C13C4.6.1 12121574 12124939 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200678   128   V: 12121574-12121701 Caenorhabditis elegans
Exon200679   63   V: 12121750-12121812 Caenorhabditis elegans
Exon200680   108   V: 12122148-12122255 Caenorhabditis elegans
Exon200681   66   V: 12122304-12122369 Caenorhabditis elegans
Exon200682   318   V: 12122419-12122736 Caenorhabditis elegans
Exon200683   146   V: 12122784-12122929 Caenorhabditis elegans
Exon200684   111   V: 12122979-12123089 Caenorhabditis elegans
Exon200685   85   V: 12123215-12123299 Caenorhabditis elegans
Exon200686   57   V: 12123345-12123401 Caenorhabditis elegans
Exon200687   67   V: 12123450-12123516 Caenorhabditis elegans
Exon200688   103   V: 12123566-12123668 Caenorhabditis elegans
Exon200689   95   V: 12123817-12123911 Caenorhabditis elegans
Exon200690   234   V: 12124706-12124939 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C13C4.6.1 12121574 12124939 1

1 Sequence

Length
1581

1 Sequence Ontology Term

Identifier Name Description
transcript