WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27A7.6c.1 Sequence Name  C27A7.6c.1
Length (nt)  1843   Chromosome Location  V: 12124855-12128939
Chromosome . Primary Identifier  V Chromosome Location . Start  12124855
Chromosome Location . End  12128939 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27A7.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007757 C27A7.6 C27A7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27A7.6c C27A7.6c 1500   V: 12125152-12125248

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.6c.1 12124855 12128939 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200692   394   V: 12124855-12125248 Caenorhabditis elegans
Exon200700   70   V: 12125295-12125364 Caenorhabditis elegans
Exon200708   183   V: 12125411-12125593 Caenorhabditis elegans
Exon200716   67   V: 12125645-12125711 Caenorhabditis elegans
Exon200724   57   V: 12125813-12125869 Caenorhabditis elegans
Exon200732   85   V: 12125920-12126004 Caenorhabditis elegans
Exon200740   114   V: 12126058-12126171 Caenorhabditis elegans
Exon200748   146   V: 12126219-12126364 Caenorhabditis elegans
Exon200757   98   V: 12126408-12126505 Caenorhabditis elegans
Exon200764   220   V: 12126551-12126770 Caenorhabditis elegans
Exon200773   66   V: 12126816-12126881 Caenorhabditis elegans
Exon200780   108   V: 12126952-12127059 Caenorhabditis elegans
Exon200787   63   V: 12127103-12127165 Caenorhabditis elegans
Exon200793   96   V: 12127221-12127316 Caenorhabditis elegans
Exon200797   76   V: 12128864-12128939 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.6c.1 12124855 12128939 -1

1 Sequence

Length
1843

1 Sequence Ontology Term

Identifier Name Description
transcript