WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27A7.6d.3 Sequence Name  C27A7.6d.3
Length (nt)  1725   Chromosome Location  V: 12124856-12127220
Chromosome . Primary Identifier  V Chromosome Location . Start  12124856
Chromosome Location . End  12127220 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27A7.6d.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007757 C27A7.6 C27A7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27A7.6d C27A7.6d 834   V: 12125152-12125248

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.6d.3 12124856 12127220 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200693   393   V: 12124856-12125248 Caenorhabditis elegans
Exon200703   70   V: 12125295-12125364 Caenorhabditis elegans
Exon200711   183   V: 12125411-12125593 Caenorhabditis elegans
Exon200719   67   V: 12125645-12125711 Caenorhabditis elegans
Exon200727   57   V: 12125813-12125869 Caenorhabditis elegans
Exon200735   85   V: 12125920-12126004 Caenorhabditis elegans
Exon200743   114   V: 12126058-12126171 Caenorhabditis elegans
Exon200751   146   V: 12126219-12126364 Caenorhabditis elegans
Exon200759   98   V: 12126408-12126505 Caenorhabditis elegans
Exon200767   220   V: 12126551-12126770 Caenorhabditis elegans
Exon200775   66   V: 12126816-12126881 Caenorhabditis elegans
Exon200783   108   V: 12126952-12127059 Caenorhabditis elegans
Exon200791   118   V: 12127103-12127220 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.6d.3 12124856 12127220 -1

1 Sequence

Length
1725

1 Sequence Ontology Term

Identifier Name Description
transcript