WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27A7.6d.4 Sequence Name  C27A7.6d.4
Length (nt)  1606   Chromosome Location  V: 12124858-12127060
Chromosome . Primary Identifier  V Chromosome Location . Start  12124858
Chromosome Location . End  12127060 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27A7.6d.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007757 C27A7.6 C27A7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27A7.6d C27A7.6d 834   V: 12125152-12125248

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.6d.4 12124858 12127060 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200694   391   V: 12124858-12125248 Caenorhabditis elegans
Exon200704   70   V: 12125295-12125364 Caenorhabditis elegans
Exon200712   183   V: 12125411-12125593 Caenorhabditis elegans
Exon200720   67   V: 12125645-12125711 Caenorhabditis elegans
Exon200728   57   V: 12125813-12125869 Caenorhabditis elegans
Exon200736   85   V: 12125920-12126004 Caenorhabditis elegans
Exon200744   114   V: 12126058-12126171 Caenorhabditis elegans
Exon200752   146   V: 12126219-12126364 Caenorhabditis elegans
Exon200760   98   V: 12126408-12126505 Caenorhabditis elegans
Exon200768   220   V: 12126551-12126770 Caenorhabditis elegans
Exon200776   66   V: 12126816-12126881 Caenorhabditis elegans
Exon200785   109   V: 12126952-12127060 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.6d.4 12124858 12127060 -1

1 Sequence

Length
1606

1 Sequence Ontology Term

Identifier Name Description
transcript