WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27A7.6d.1 Sequence Name  C27A7.6d.1
Length (nt)  1771   Chromosome Location  V: 12124858-12127323
Chromosome . Primary Identifier  V Chromosome Location . Start  12124858
Chromosome Location . End  12127323 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27A7.6d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007757 C27A7.6 C27A7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27A7.6d C27A7.6d 834   V: 12125152-12125248

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.6d.1 12124858 12127323 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200695   391   V: 12124858-12125248 Caenorhabditis elegans
Exon200701   70   V: 12125295-12125364 Caenorhabditis elegans
Exon200709   183   V: 12125411-12125593 Caenorhabditis elegans
Exon200717   67   V: 12125645-12125711 Caenorhabditis elegans
Exon200725   57   V: 12125813-12125869 Caenorhabditis elegans
Exon200733   85   V: 12125920-12126004 Caenorhabditis elegans
Exon200741   114   V: 12126058-12126171 Caenorhabditis elegans
Exon200749   146   V: 12126219-12126364 Caenorhabditis elegans
Exon200758   98   V: 12126408-12126505 Caenorhabditis elegans
Exon200765   220   V: 12126551-12126770 Caenorhabditis elegans
Exon200774   66   V: 12126816-12126881 Caenorhabditis elegans
Exon200781   108   V: 12126952-12127059 Caenorhabditis elegans
Exon200788   63   V: 12127103-12127165 Caenorhabditis elegans
Exon200795   103   V: 12127221-12127323 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.6d.1 12124858 12127323 -1

1 Sequence

Length
1771

1 Sequence Ontology Term

Identifier Name Description
transcript