WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27A7.6d.5 Sequence Name  C27A7.6d.5
Length (nt)  1492   Chromosome Location  V: 12124867-12126885
Chromosome . Primary Identifier  V Chromosome Location . Start  12124867
Chromosome Location . End  12126885 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27A7.6d.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007757 C27A7.6 C27A7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27A7.6d C27A7.6d 834   V: 12125152-12125248

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.6d.5 12124867 12126885 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200696   382   V: 12124867-12125248 Caenorhabditis elegans
Exon200705   70   V: 12125295-12125364 Caenorhabditis elegans
Exon200713   183   V: 12125411-12125593 Caenorhabditis elegans
Exon200721   67   V: 12125645-12125711 Caenorhabditis elegans
Exon200729   57   V: 12125813-12125869 Caenorhabditis elegans
Exon200737   85   V: 12125920-12126004 Caenorhabditis elegans
Exon200745   114   V: 12126058-12126171 Caenorhabditis elegans
Exon200753   146   V: 12126219-12126364 Caenorhabditis elegans
Exon200761   98   V: 12126408-12126505 Caenorhabditis elegans
Exon200769   220   V: 12126551-12126770 Caenorhabditis elegans
Exon200778   70   V: 12126816-12126885 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.6d.5 12124867 12126885 -1

1 Sequence

Length
1492

1 Sequence Ontology Term

Identifier Name Description
transcript