WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27A7.6d.2 Sequence Name  C27A7.6d.2
Length (nt)  1434   Chromosome Location  V: 12125152-12127284
Chromosome . Primary Identifier  V Chromosome Location . Start  12125152
Chromosome Location . End  12127284 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27A7.6d.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007757 C27A7.6 C27A7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27A7.6d C27A7.6d 834   V: 12125152-12125248

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.6d.2 12125152 12127284 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200697   97   V: 12125152-12125248 Caenorhabditis elegans
Exon200702   70   V: 12125295-12125364 Caenorhabditis elegans
Exon200710   183   V: 12125411-12125593 Caenorhabditis elegans
Exon200718   67   V: 12125645-12125711 Caenorhabditis elegans
Exon200726   57   V: 12125813-12125869 Caenorhabditis elegans
Exon200734   85   V: 12125920-12126004 Caenorhabditis elegans
Exon200742   114   V: 12126058-12126171 Caenorhabditis elegans
Exon200750   146   V: 12126219-12126364 Caenorhabditis elegans
Exon200755   96   V: 12126408-12126503 Caenorhabditis elegans
Exon200766   220   V: 12126551-12126770 Caenorhabditis elegans
Exon200771   65   V: 12126816-12126880 Caenorhabditis elegans
Exon200782   108   V: 12126952-12127059 Caenorhabditis elegans
Exon200790   65   V: 12127103-12127167 Caenorhabditis elegans
Exon200796   61   V: 12127224-12127284 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.6d.2 12125152 12127284 -1

1 Sequence

Length
1434

1 Sequence Ontology Term

Identifier Name Description
transcript