WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27A7.1c.1 Sequence Name  C27A7.1c.1
Length (nt)  2301   Chromosome Location  V: 12133568-12137269
Chromosome . Primary Identifier  V Chromosome Location . Start  12133568
Chromosome Location . End  12137269 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27A7.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007753 enpp-1 C27A7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27A7.1c C27A7.1c 2301   V: 12133568-12133678

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.1c.1 12133568 12137269 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200808   111   V: 12133568-12133678 Caenorhabditis elegans
Exon200811   227   V: 12134106-12134332 Caenorhabditis elegans
Exon200815   289   V: 12134389-12134677 Caenorhabditis elegans
Exon200819   358   V: 12134768-12135125 Caenorhabditis elegans
Exon200823   105   V: 12135174-12135278 Caenorhabditis elegans
Exon200827   157   V: 12135325-12135481 Caenorhabditis elegans
Exon200831   261   V: 12135763-12136023 Caenorhabditis elegans
Exon200835   67   V: 12136072-12136138 Caenorhabditis elegans
Exon200839   265   V: 12136184-12136448 Caenorhabditis elegans
Exon200843   54   V: 12136495-12136548 Caenorhabditis elegans
Exon200847   118   V: 12136591-12136708 Caenorhabditis elegans
Exon200851   148   V: 12136933-12137080 Caenorhabditis elegans
Exon200853   141   V: 12137129-12137269 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.1c.1 12133568 12137269 1

1 Sequence

Length
2301

1 Sequence Ontology Term

Identifier Name Description
transcript