WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27A7.3a.1 Sequence Name  C27A7.3a.1
Length (nt)  2280   Chromosome Location  V: 12140952-12144286
Chromosome . Primary Identifier  V Chromosome Location . Start  12140952
Chromosome Location . End  12144286 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27A7.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007755 C27A7.3 C27A7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27A7.3a C27A7.3a 2232   V: 12140952-12141019

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.3a.1 12140952 12144286 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200867   68   V: 12140952-12141019 Caenorhabditis elegans
Exon200869   79   V: 12141424-12141502 Caenorhabditis elegans
Exon200872   277   V: 12141583-12141859 Caenorhabditis elegans
Exon200876   89   V: 12141901-12141989 Caenorhabditis elegans
Exon200880   144   V: 12142037-12142180 Caenorhabditis elegans
Exon200884   96   V: 12142223-12142318 Caenorhabditis elegans
Exon200888   214   V: 12142359-12142572 Caenorhabditis elegans
Exon200892   157   V: 12142620-12142776 Caenorhabditis elegans
Exon200896   249   V: 12142826-12143074 Caenorhabditis elegans
Exon200900   64   V: 12143138-12143201 Caenorhabditis elegans
Exon200904   121   V: 12143247-12143367 Caenorhabditis elegans
Exon200908   153   V: 12143419-12143571 Caenorhabditis elegans
Exon200914   232   V: 12143621-12143852 Caenorhabditis elegans
Exon200918   148   V: 12143897-12144044 Caenorhabditis elegans
Exon200924   189   V: 12144098-12144286 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.3a.1 12140952 12144286 1

1 Sequence

Length
2280

1 Sequence Ontology Term

Identifier Name Description
transcript