WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27A7.3d.1 Sequence Name  C27A7.3d.1
Length (nt)  2163   Chromosome Location  V: 12141418-12144285
Chromosome . Primary Identifier  V Chromosome Location . Start  12141418
Chromosome Location . End  12144285 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27A7.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007755 C27A7.3 C27A7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27A7.3d C27A7.3d 2088   V: 12141446-12141502

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.3d.1 12141418 12144285 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200868   85   V: 12141418-12141502 Caenorhabditis elegans
Exon200875   277   V: 12141583-12141859 Caenorhabditis elegans
Exon200879   89   V: 12141901-12141989 Caenorhabditis elegans
Exon200883   144   V: 12142037-12142180 Caenorhabditis elegans
Exon200887   96   V: 12142223-12142318 Caenorhabditis elegans
Exon200891   214   V: 12142359-12142572 Caenorhabditis elegans
Exon200895   157   V: 12142620-12142776 Caenorhabditis elegans
Exon200899   249   V: 12142826-12143074 Caenorhabditis elegans
Exon200903   64   V: 12143138-12143201 Caenorhabditis elegans
Exon200907   121   V: 12143247-12143367 Caenorhabditis elegans
Exon200911   153   V: 12143419-12143571 Caenorhabditis elegans
Exon200913   54   V: 12143621-12143674 Caenorhabditis elegans
Exon200917   124   V: 12143729-12143852 Caenorhabditis elegans
Exon200921   148   V: 12143897-12144044 Caenorhabditis elegans
Exon200923   188   V: 12144098-12144285 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.3d.1 12141418 12144285 1

1 Sequence

Length
2163

1 Sequence Ontology Term

Identifier Name Description
transcript