WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27A7.3b.1 Sequence Name  C27A7.3b.1
Length (nt)  2142   Chromosome Location  V: 12141446-12144238
Chromosome . Primary Identifier  V Chromosome Location . Start  12141446
Chromosome Location . End  12144238 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27A7.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007755 C27A7.3 C27A7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27A7.3b C27A7.3b 2142   V: 12141446-12141502

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.3b.1 12141446 12144238 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200871   57   V: 12141446-12141502 Caenorhabditis elegans
Exon200873   277   V: 12141583-12141859 Caenorhabditis elegans
Exon200877   89   V: 12141901-12141989 Caenorhabditis elegans
Exon200881   144   V: 12142037-12142180 Caenorhabditis elegans
Exon200885   96   V: 12142223-12142318 Caenorhabditis elegans
Exon200889   214   V: 12142359-12142572 Caenorhabditis elegans
Exon200893   157   V: 12142620-12142776 Caenorhabditis elegans
Exon200897   249   V: 12142826-12143074 Caenorhabditis elegans
Exon200901   64   V: 12143138-12143201 Caenorhabditis elegans
Exon200905   121   V: 12143247-12143367 Caenorhabditis elegans
Exon200909   153   V: 12143419-12143571 Caenorhabditis elegans
Exon200915   232   V: 12143621-12143852 Caenorhabditis elegans
Exon200919   148   V: 12143897-12144044 Caenorhabditis elegans
Exon200922   141   V: 12144098-12144238 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.3b.1 12141446 12144238 1

1 Sequence

Length
2142

1 Sequence Ontology Term

Identifier Name Description
transcript