WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK863.4.1 Sequence Name  ZK863.4.1
Length (nt)  2252   Chromosome Location  V: 12181501-12184194
Chromosome . Primary Identifier  V Chromosome Location . Start  12181501
Chromosome Location . End  12184194 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK863.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014124 usip-1 ZK863.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK863.4 ZK863.4 1989   V: 12181745-12182092

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK863.4.1 12181501 12184194 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201094   592   V: 12181501-12182092 Caenorhabditis elegans
Exon201095   258   V: 12182147-12182404 Caenorhabditis elegans
Exon201097   148   V: 12182451-12182598 Caenorhabditis elegans
Exon201099   248   V: 12182648-12182895 Caenorhabditis elegans
Exon201101   165   V: 12182942-12183106 Caenorhabditis elegans
Exon201103   183   V: 12183149-12183331 Caenorhabditis elegans
Exon201105   87   V: 12183378-12183464 Caenorhabditis elegans
Exon201107   276   V: 12183523-12183798 Caenorhabditis elegans
Exon201109   126   V: 12183847-12183972 Caenorhabditis elegans
Exon201112   169   V: 12184026-12184194 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK863.4.1 12181501 12184194 -1

1 Sequence

Length
2252

1 Sequence Ontology Term

Identifier Name Description
transcript