WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK836.2a.1 Sequence Name  ZK836.2a.1
Length (nt)  3041   Chromosome Location  V: 12194507-12205494
Chromosome . Primary Identifier  V Chromosome Location . Start  12194507
Chromosome Location . End  12205494 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK836.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014098 ogdh-2 ZK836.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK836.2a ZK836.2a 2736   V: 12194536-12194572

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK836.2a.1 12194507 12205494 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201087   66   V: 12194507-12194572 Caenorhabditis elegans
Exon201091   99   V: 12197141-12197239 Caenorhabditis elegans
Exon201092   109   V: 12197287-12197395 Caenorhabditis elegans
Exon201095   139   V: 12200830-12200968 Caenorhabditis elegans
Exon201097   1088   V: 12201023-12202110 Caenorhabditis elegans
Exon201099   760   V: 12202164-12202923 Caenorhabditis elegans
Exon201101   66   V: 12203366-12203431 Caenorhabditis elegans
Exon201103   250   V: 12203545-12203794 Caenorhabditis elegans
Exon201105   86   V: 12204980-12205065 Caenorhabditis elegans
Exon201108   378   V: 12205117-12205494 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK836.2a.1 12194507 12205494 1

1 Sequence

Length
3041

1 Sequence Ontology Term

Identifier Name Description
transcript