WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K12F2.1.1 Sequence Name  K12F2.1.1
Length (nt)  6104   Chromosome Location  V: 12226817-12234343
Chromosome . Primary Identifier  V Chromosome Location . Start  12226817
Chromosome Location . End  12234343 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12F2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003515 myo-3 K12F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12F2.1 K12F2.1 5910   V: 12226968-12227183

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K12F2.1.1 12226817 12234343 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201153   367   V: 12226817-12227183 Caenorhabditis elegans
Exon201154   4360   V: 12227260-12231619 Caenorhabditis elegans
Exon201155   529   V: 12231684-12232212 Caenorhabditis elegans
Exon201156   300   V: 12232311-12232610 Caenorhabditis elegans
Exon201157   157   V: 12232658-12232814 Caenorhabditis elegans
Exon201158   212   V: 12232884-12233095 Caenorhabditis elegans
Exon201162   179   V: 12234165-12234343 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K12F2.1.1 12226817 12234343 -1

1 Sequence

Length
6104

1 Sequence Ontology Term

Identifier Name Description
transcript