WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04H1.4b.1 Sequence Name  T04H1.4b.1
Length (nt)  4113   Chromosome Location  V: 12245646-12251233
Chromosome . Primary Identifier  V Chromosome Location . Start  12245646
Chromosome Location . End  12251233 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04H1.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004296 rad-50 T04H1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04H1.4b T04H1.4b 3939   V: 12245646-12245656

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04H1.4b.1 12245646 12251233 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201184   11   V: 12245646-12245656 Caenorhabditis elegans
Exon201185   49   V: 12246585-12246633 Caenorhabditis elegans
Exon201188   111   V: 12246689-12246799 Caenorhabditis elegans
Exon201190   81   V: 12246847-12246927 Caenorhabditis elegans
Exon201192   102   V: 12246971-12247072 Caenorhabditis elegans
Exon201194   282   V: 12247127-12247408 Caenorhabditis elegans
Exon201196   220   V: 12247455-12247674 Caenorhabditis elegans
Exon201198   251   V: 12247722-12247972 Caenorhabditis elegans
Exon201200   1131   V: 12248022-12249152 Caenorhabditis elegans
Exon201202   680   V: 12249210-12249889 Caenorhabditis elegans
Exon201204   543   V: 12249941-12250483 Caenorhabditis elegans
Exon201206   313   V: 12250539-12250851 Caenorhabditis elegans
Exon201207   339   V: 12250895-12251233 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04H1.4b.1 12245646 12251233 1

1 Sequence

Length
4113

1 Sequence Ontology Term

Identifier Name Description
transcript