WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T04H1.4a Sequence Name  T04H1.4a
Length (nt)  3897   Chromosome Location  V: 12246616-12246633
Chromosome . Primary Identifier  V Chromosome Location . Start  12246616
Chromosome Location . End  12246633
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04H1.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21149 RAD-50, isoform a 150.4 1298 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00066952
WBRNAi00052418
WBRNAi00018158
WBRNAi00064209
WBRNAi00097182
WBRNAi00077851
WBRNAi00007683
WBRNAi00111846
WBRNAi00064183
WBRNAi00097227
WBRNAi00097272
WBRNAi00097317

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T04H1.4a 12246616 12246633 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004296 rad-50 T04H1.4 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:T04H1.4a 12246616 12246633 1
CDS:T04H1.4a 12246689 12246799 1
CDS:T04H1.4a 12246847 12246927 1
CDS:T04H1.4a 12246971 12247072 1
CDS:T04H1.4a 12247127 12247408 1
CDS:T04H1.4a 12247455 12247674 1
CDS:T04H1.4a 12247722 12247972 1
CDS:T04H1.4a 12248022 12249152 1
CDS:T04H1.4a 12249210 12249889 1
CDS:T04H1.4a 12249941 12250483 1
CDS:T04H1.4a 12250539 12250851 1
CDS:T04H1.4a 12250895 12251059 1

1 Sequence

Length
3897

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T04H1.4a.1 T04H1.4a.1 4084   V: 12246616-12251246