WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04H1.8.1 Sequence Name  T04H1.8.1
Length (nt)  1696   Chromosome Location  V: 12258982-12261215
Chromosome . Primary Identifier  V Chromosome Location . Start  12258982
Chromosome Location . End  12261215 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04H1.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011453 ugt-56 T04H1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04H1.8 T04H1.8 1575   V: 12258998-12259147

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04H1.8.1 12258982 12261215 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201286   166   V: 12258982-12259147 Caenorhabditis elegans
Exon201287   168   V: 12259388-12259555 Caenorhabditis elegans
Exon201288   241   V: 12259622-12259862 Caenorhabditis elegans
Exon201289   281   V: 12259911-12260191 Caenorhabditis elegans
Exon201290   235   V: 12260284-12260518 Caenorhabditis elegans
Exon201291   226   V: 12260567-12260792 Caenorhabditis elegans
Exon201292   379   V: 12260837-12261215 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04H1.8.1 12258982 12261215 1

1 Sequence

Length
1696

1 Sequence Ontology Term

Identifier Name Description
transcript