WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F55C5.9 Sequence Name  F55C5.9
Length (nt)  1002   Chromosome Location  V: 12292214-12292257
Chromosome . Primary Identifier  V Chromosome Location . Start  12292214
Chromosome Location . End  12292257
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55C5.9

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33111 SRH-16 38.4 333 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00048475
WBRNAi00015713
WBRNAi00032867
WBRNAi00066674
WBRNAi00066587

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F55C5.9 12292214 12292257 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005241 srh-16 F55C5.9 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F55C5.9 12292214 12292257 1
CDS:F55C5.9 12292303 12292428 1
CDS:F55C5.9 12292477 12292622 1
CDS:F55C5.9 12292680 12292882 1
CDS:F55C5.9 12293229 12293459 1
CDS:F55C5.9 12293504 12293582 1
CDS:F55C5.9 12293630 12293802 1

1 Sequence

Length
1002

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55C5.9.1 F55C5.9.1 1701   V: 12291861-12294196