WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R04F11.1.1 Sequence Name  R04F11.1.1
Length (nt)  978   Chromosome Location  V: 12308725-12310356
Chromosome . Primary Identifier  V Chromosome Location . Start  12308725
Chromosome Location . End  12310356 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04F11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011014 hpo-30 R04F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R04F11.1 R04F11.1 840   V: 12308849-12308942

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R04F11.1.1 12308725 12310356 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201336   218   V: 12308725-12308942 Caenorhabditis elegans
Exon201337   158   V: 12309030-12309187 Caenorhabditis elegans
Exon201338   266   V: 12309244-12309509 Caenorhabditis elegans
Exon201339   108   V: 12309925-12310032 Caenorhabditis elegans
Exon201340   112   V: 12310077-12310188 Caenorhabditis elegans
Exon201341   116   V: 12310241-12310356 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R04F11.1.1 12308725 12310356 -1

1 Sequence

Length
978

1 Sequence Ontology Term

Identifier Name Description
transcript