WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R04F11.4c.1 Sequence Name  R04F11.4c.1
Length (nt)  2318   Chromosome Location  V: 12320172-12337994
Chromosome . Primary Identifier  V Chromosome Location . Start  12320172
Chromosome Location . End  12337994 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04F11.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006668 twk-13 R04F11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R04F11.4c R04F11.4c 1839   V: 12320560-12320668

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R04F11.4c.1 12320172 12337994 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201362   497   V: 12320172-12320668 Caenorhabditis elegans
Exon201367   361   V: 12320734-12321094 Caenorhabditis elegans
Exon201371   93   V: 12321920-12322012 Caenorhabditis elegans
Exon201375   96   V: 12322059-12322154 Caenorhabditis elegans
Exon201379   135   V: 12322366-12322500 Caenorhabditis elegans
Exon201383   273   V: 12323065-12323337 Caenorhabditis elegans
Exon201388   117   V: 12323387-12323503 Caenorhabditis elegans
Exon201393   143   V: 12324468-12324610 Caenorhabditis elegans
Exon201397   143   V: 12324666-12324808 Caenorhabditis elegans
Exon201401   84   V: 12325135-12325218 Caenorhabditis elegans
Exon201408   109   V: 12326467-12326575 Caenorhabditis elegans
Exon201422   81   V: 12335823-12335903 Caenorhabditis elegans
Exon201426   119   V: 12337648-12337766 Caenorhabditis elegans
Exon201427   67   V: 12337928-12337994 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R04F11.4c.1 12320172 12337994 -1

1 Sequence

Length
2318

1 Sequence Ontology Term

Identifier Name Description
transcript