WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F23H12.6.1 Sequence Name  F23H12.6.1
Length (nt)  3087   Chromosome Location  V: 12363754-12369537
Chromosome . Primary Identifier  V Chromosome Location . Start  12363754
Chromosome Location . End  12369537 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F23H12.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001539 gcy-13 F23H12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F23H12.6 F23H12.6 3087   V: 12363754-12363810

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F23H12.6.1 12363754 12369537 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201479   57   V: 12363754-12363810 Caenorhabditis elegans
Exon201480   95   V: 12363856-12363950 Caenorhabditis elegans
Exon201481   169   V: 12363997-12364165 Caenorhabditis elegans
Exon201482   105   V: 12364210-12364314 Caenorhabditis elegans
Exon201483   69   V: 12364930-12364998 Caenorhabditis elegans
Exon201484   124   V: 12365043-12365166 Caenorhabditis elegans
Exon201488   141   V: 12366199-12366339 Caenorhabditis elegans
Exon201489   187   V: 12366590-12366776 Caenorhabditis elegans
Exon201490   150   V: 12366892-12367041 Caenorhabditis elegans
Exon201491   145   V: 12367090-12367234 Caenorhabditis elegans
Exon201492   666   V: 12367323-12367988 Caenorhabditis elegans
Exon201493   267   V: 12368033-12368299 Caenorhabditis elegans
Exon201494   227   V: 12368350-12368576 Caenorhabditis elegans
Exon201495   126   V: 12368657-12368782 Caenorhabditis elegans
Exon201496   218   V: 12368832-12369049 Caenorhabditis elegans
Exon201497   133   V: 12369101-12369233 Caenorhabditis elegans
Exon201498   110   V: 12369283-12369392 Caenorhabditis elegans
Exon201499   98   V: 12369440-12369537 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F23H12.6.1 12363754 12369537 -1

1 Sequence

Length
3087

1 Sequence Ontology Term

Identifier Name Description
transcript