WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F23H12.6.1 Sequence Name  F23H12.6.1
Length (nt)  3087   Chromosome Location  V: 12363754-12369537
Chromosome . Primary Identifier  V Chromosome Location . Start  12363754
Chromosome Location . End  12369537 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F23H12.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001539 gcy-13 F23H12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F23H12.6 F23H12.6 3087   V: 12363754-12363810

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F23H12.6.1 12363754 12369537 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201534   57   V: 12363754-12363810 Caenorhabditis elegans
Exon201535   95   V: 12363856-12363950 Caenorhabditis elegans
Exon201536   169   V: 12363997-12364165 Caenorhabditis elegans
Exon201537   105   V: 12364210-12364314 Caenorhabditis elegans
Exon201538   69   V: 12364930-12364998 Caenorhabditis elegans
Exon201539   124   V: 12365043-12365166 Caenorhabditis elegans
Exon201543   141   V: 12366199-12366339 Caenorhabditis elegans
Exon201544   187   V: 12366590-12366776 Caenorhabditis elegans
Exon201545   150   V: 12366892-12367041 Caenorhabditis elegans
Exon201546   145   V: 12367090-12367234 Caenorhabditis elegans
Exon201547   666   V: 12367323-12367988 Caenorhabditis elegans
Exon201548   267   V: 12368033-12368299 Caenorhabditis elegans
Exon201549   227   V: 12368350-12368576 Caenorhabditis elegans
Exon201550   126   V: 12368657-12368782 Caenorhabditis elegans
Exon201551   218   V: 12368832-12369049 Caenorhabditis elegans
Exon201552   133   V: 12369101-12369233 Caenorhabditis elegans
Exon201553   110   V: 12369283-12369392 Caenorhabditis elegans
Exon201554   98   V: 12369440-12369537 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F23H12.6.1 12363754 12369537 -1

1 Sequence

Length
3087

1 Sequence Ontology Term

Identifier Name Description
transcript