WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K01D12.6.1 Sequence Name  K01D12.6.1
Length (nt)  1797   Chromosome Location  V: 12398753-12400859
Chromosome . Primary Identifier  V Chromosome Location . Start  12398753
Chromosome Location . End  12400859 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01D12.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010465 miga-1 K01D12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K01D12.6 K01D12.6 1500   V: 12398956-12399108

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K01D12.6.1 12398753 12400859 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201573   356   V: 12398753-12399108 Caenorhabditis elegans
Exon201574   492   V: 12399157-12399648 Caenorhabditis elegans
Exon201575   317   V: 12399744-12400060 Caenorhabditis elegans
Exon201576   410   V: 12400105-12400514 Caenorhabditis elegans
Exon201577   98   V: 12400587-12400684 Caenorhabditis elegans
Exon201578   124   V: 12400736-12400859 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K01D12.6.1 12398753 12400859 -1

1 Sequence

Length
1797

1 Sequence Ontology Term

Identifier Name Description
transcript