WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K01D12.12.1 Sequence Name  K01D12.12.1
Length (nt)  923   Chromosome Location  V: 12412487-12413701
Chromosome . Primary Identifier  V Chromosome Location . Start  12412487
Chromosome Location . End  12413701 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01D12.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010471 cdr-6 K01D12.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K01D12.12 K01D12.12 834   V: 12412573-12412722

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K01D12.12.1 12412487 12413701 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201611   236   V: 12412487-12412722 Caenorhabditis elegans
Exon201612   256   V: 12412769-12413024 Caenorhabditis elegans
Exon201613   68   V: 12413119-12413186 Caenorhabditis elegans
Exon201614   123   V: 12413240-12413362 Caenorhabditis elegans
Exon201615   132   V: 12413408-12413539 Caenorhabditis elegans
Exon201616   108   V: 12413594-12413701 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K01D12.12.1 12412487 12413701 -1

1 Sequence

Length
923

1 Sequence Ontology Term

Identifier Name Description
transcript