WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54D10.9.1 Sequence Name  C54D10.9.1
Length (nt)  957   Chromosome Location  V: 12447153-12448705
Chromosome . Primary Identifier  V Chromosome Location . Start  12447153
Chromosome Location . End  12448705 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54D10.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008303 C54D10.9 C54D10.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54D10.9 C54D10.9 567   V: 12447499-12447556

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C54D10.9.1 12447153 12448705 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201720   404   V: 12447153-12447556 Caenorhabditis elegans
Exon201721   168   V: 12447606-12447773 Caenorhabditis elegans
Exon201722   73   V: 12448220-12448292 Caenorhabditis elegans
Exon201723   130   V: 12448336-12448465 Caenorhabditis elegans
Exon201724   182   V: 12448524-12448705 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C54D10.9.1 12447153 12448705 1

1 Sequence

Length
957

1 Sequence Ontology Term

Identifier Name Description
transcript