WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W04D2.1d Sequence Name  W04D2.1d
Length (nt)  2472   Chromosome Location  V: 12479830-12480061
Chromosome . Primary Identifier  V Chromosome Location . Start  12479830
Chromosome Location . End  12480061
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04D2.1d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46756 ATN-1, isoform d 95.6 823 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00067215
WBRNAi00007427
WBRNAi00054765
WBRNAi00019589
WBRNAi00109544
WBRNAi00036270
WBRNAi00110192
WBRNAi00080494
WBRNAi00054766
WBRNAi00111870
WBRNAi00109155
WBRNAi00109253
WBRNAi00091678
WBRNAi00091693
WBRNAi00091708
WBRNAi00091723
WBRNAi00091738
WBRNAi00091753
WBRNAi00091774
WBRNAi00109447
WBRNAi00109350

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W04D2.1d 12479830 12480061 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000228 atn-1 W04D2.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:W04D2.1d 12479830 12480061 1
CDS:W04D2.1d 12480362 12480610 1
CDS:W04D2.1d 12481114 12481196 1
CDS:W04D2.1d 12481284 12481376 1
CDS:W04D2.1d 12481539 12482565 1
CDS:W04D2.1d 12482624 12483056 1
CDS:W04D2.1d 12483187 12483391 1
CDS:W04D2.1d 12483898 12484047 1

1 Sequence

Length
2472

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W04D2.1d.1 W04D2.1d.1 2472   V: 12479830-12484047