WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W04D2.3b.1 Sequence Name  W04D2.3b.1
Length (nt)  1581   Chromosome Location  V: 12487234-12493269
Chromosome . Primary Identifier  V Chromosome Location . Start  12487234
Chromosome Location . End  12493269 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04D2.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002133 inx-11 W04D2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W04D2.3b W04D2.3b 1398   V: 12487266-12487322

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W04D2.3b.1 12487234 12493269 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201855   89   V: 12487234-12487322 Caenorhabditis elegans
Exon201857   141   V: 12487369-12487509 Caenorhabditis elegans
Exon201861   83   V: 12489870-12489952 Caenorhabditis elegans
Exon201863   116   V: 12490022-12490137 Caenorhabditis elegans
Exon201865   268   V: 12490188-12490455 Caenorhabditis elegans
Exon201867   118   V: 12490804-12490921 Caenorhabditis elegans
Exon201869   95   V: 12490974-12491068 Caenorhabditis elegans
Exon201873   295   V: 12492502-12492796 Caenorhabditis elegans
Exon201875   111   V: 12492849-12492959 Caenorhabditis elegans
Exon201877   265   V: 12493005-12493269 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W04D2.3b.1 12487234 12493269 1

1 Sequence

Length
1581

1 Sequence Ontology Term

Identifier Name Description
transcript