WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W04D2.3a Sequence Name  W04D2.3a
Length (nt)  1398   Chromosome Location  V: 12489465-12489662
Chromosome . Primary Identifier  V Chromosome Location . Start  12489465
Chromosome Location . End  12489662
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04D2.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE06538 INX-11, isoform a 54.6 465 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00107717
WBRNAi00107716
WBRNAi00054768
WBRNAi00019590
WBRNAi00036272

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:W04D2.3a 12489465 12489662 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002133 inx-11 W04D2.3 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier 		Start End Strand
CDS:W04D2.3a 12489465 12489662 1
CDS:W04D2.3a 12489870 12489952 1
CDS:W04D2.3a 12490022 12490137 1
CDS:W04D2.3a 12490188 12490455 1
CDS:W04D2.3a 12490804 12490921 1
CDS:W04D2.3a 12490974 12491068 1
CDS:W04D2.3a 12492502 12492796 1
CDS:W04D2.3a 12492849 12492959 1
CDS:W04D2.3a 12493005 12493118 1

1 Sequence

Length
1398

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W04D2.3a.1 W04D2.3a.1 1554   V: 12489460-12493269