WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W04D2.2c Sequence Name  W04D2.2c
Length (nt)  876   Chromosome Location  V: 12485050-12485058
Chromosome . Primary Identifier  V Chromosome Location . Start  12485050
Chromosome Location . End  12485058
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04D2.2c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51388 SRT-39, isoform c 33.4 291 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00054767
WBRNAi00036271

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W04D2.2c 12485050 12485058 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012242 srt-39 W04D2.2 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:W04D2.2c 12485050 12485058 1
CDS:W04D2.2c 12485104 12485402 1
CDS:W04D2.2c 12485452 12485725 1
CDS:W04D2.2c 12485775 12486068 1

1 Sequence

Length
876

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W04D2.2c.1 W04D2.2c.1 876   V: 12485050-12486068