WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00174895 Gene Name  21ur-14776
Sequence Name  ? C13C12.3 Organism  Caenorhabditis elegans
Automated Description  Is affected by ilc-17.1 based on RNA-seq studies. Biotype  SO:0001638
Genetic Position  V :4.46871 ±0.010921 Length (nt)  ? 21
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00174895

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C13C12.3 C13C12.3 21   V: 12519218-12519238
 

Other

0 CDSs

0 RNAi Result

9 Allele

Public Name
gk963271
gk963301
gk964458
gk964459
gk963618
tm10736
gk962790
WBVar02124251
gk249735

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00174895 12519218 12519238 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_12519239..12520240   1002 V: 12519239-12520240 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in ilc-17.1(syb5296) comparing to in N2 animals at L4 larva stage. DESeq2, fold change > 2, FDR < 0.05. WBPaper00066594:ilc-17.1(syb5296)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00174895 12519218 12519238 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
21

1 Sequence Ontology Term