WormMine: Gene WBGene00195704

• WormBase Gene ID: WBGene00195704
• Gene Name: C13C12.4
• Sequence Name: C13C12.4
• Organism: Caenorhabditis elegans
• Automated Description: Enriched in neurons based on RNA-seq studies. Is affected by Cry5B based on microarray studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 84

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00195704

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:C13C12.4	C13C12.4	84	V: 12520241-12520324

Other

0 CDSs

0 RNAi Result

9 Allele

• gk963271
• gk963301
• gk964458
• gk964459
• gk963618
• tm10736
• gk962790
• gk862167
• gk815040

1 Chromosome

• WormBase ID: V
• Organism: Caenorhabditis elegans
• Length (nt): 20924180

1 Chromosome Location

• Feature . Primary Identifier: WBGene00195704
• Start: 12520241
• End: 12520324
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrV_12519239..12520240
• Length (nt): 1002
• Chromosome Location: V: 12519239-12520240
• Organism: Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Neuronally enriched transcripts according to a comparison of neuronal nuclei IP samples to total nuclei using isolation of nuclei from tagged specific cell types (INTACT) technology.	DESEQ2, fold change > 2 and FDR < 0.01.	WBPaper00062103:neuron_enriched
	Transcripts that showed significantly decreased expression in animals fed with JM103 bacteria producing Cry5B, comparing to control animals fed with JM103.	ANOVA, p-value < 0.05.	WBPaper00056167:Cry5B_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00195704
• Start: 12520241
• End: 12520324
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 84

1 Sequence Ontology Term